Bogdan Paşaniuc: search on Z-Library

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1

Integrating Functional Data to Prioritize Causal Variants in Statistical Fine-Mapping Studies

Kichaev, Gleb, Yang, Wen-Yun, Lindstrom, Sara, Hormozdiari, Farhad, Eskin, Eleazar, Price, Alkes L., Kraft, Peter, Pasaniuc, Bogdan, Di Rienzo, Anna

Journal:

Year:

2014

Language:

english

File:

PDF, 544 KB

english, 2014

2

Dissecting the genetics of complex traits using summary association statistics

Pasaniuc, Bogdan, Price, Alkes L.

Journal:

Nature Reviews Genetics

Year:

2016

Language:

english

File:

PDF, 1.93 MB

english, 2016

3

Methods for fine-mapping with chromatin and expression data

Roytman, Megan, Kichaev, Gleb, Gusev, Alexander, Pasaniuc, Bogdan, Stranger, Barbara E.

Journal:

Year:

2018

Language:

english

File:

PDF, 12.59 MB

english, 2018

4

Using Extended Genealogy to Estimate Components of Heritability for 23 Quantitative and Dichotomous Traits

Zaitlen, Noah, Kraft, Peter, Patterson, Nick, Pasaniuc, Bogdan, Bhatia, Gaurav, Pollack, Samuela, Price, Alkes L., Visscher, Peter M.

Journal:

Year:

2013

Language:

english

File:

PDF, 284 KB

english, 2013

5

Genetic Control of Expression and Splicing in Developing Human Brain Informs Disease Mechanisms

Walker, Rebecca L., Ramaswami, Gokul, Hartl, Christopher, Mancuso, Nicholas, Gandal, Michael J., Torre-Ubieta, Luis de la, Pasaniuc, Bogdan, Stein, Jason L., Geschwind, Daniel H.

Journal:

Year:

2020

File:

PDF, 101 KB

2020

6

Genetic Control of Expression and Splicing in Developing Human Brain Informs Disease Mechanisms

Walker, Rebecca L., Ramaswami, Gokul, Hartl, Christopher, Mancuso, Nicholas, Gandal, Michael J., de la Torre-Ubieta, Luis, Pasaniuc, Bogdan, Stein, Jason L., Geschwind, Daniel H.

Journal:

Year:

2020

File:

PDF, 135 KB

2020

7

Leveraging population admixture to characterize the heritability of complex traits

Zaitlen, Noah, Pasaniuc, Bogdan, Sankararaman, Sriram, Bhatia, Gaurav, Zhang, Jianqi, Gusev, Alexander, Young, Taylor, Tandon, Arti, Pollack, Samuela, Vilhjálmsson, Bjarni J, Assimes, Themistocles L,

Journal:

Nature Genetics

Year:

2014

Language:

english

File:

PDF, 875 KB

english, 2014

8

Whole-exome sequencing of over 4,100 men of African ancestry and prostate cancer risk

Rand, Kristin A., Rohland, Nadin, Tandon, Arti, Stram, Alex, Sheng, Xin, Do, Ron, Pasaniuc, Bogdan, Allen, Alex, Quinque, Dominique, Mallick, Swapan, Le Marchand, Loic, Kaggwa, Sam, Lubwama, Alex, Str

Journal:

Human Molecular Genetics

Year:

2015

Language:

english

File:

PDF, 448 KB

english, 2015

9

Enhanced methods to detect haplotypic effects on gene expression

Brown, Robert, Kichaev, Gleb, Mancuso, Nicholas, Boocock, James, Pasaniuc, Bogdan

Journal:

Year:

2017

Language:

english

File:

PDF, 564 KB

english, 2017

10

Large-scale transcriptome-wide association study identifies new prostate cancer risk regions

Mancuso, Nicholas, Gayther, Simon, Gusev, Alexander, Zheng, Wei, Penney, Kathryn L., Kote-Jarai, Zsofia, Eeles, Rosalind, Freedman, Matthew, Haiman, Christopher, Pasaniuc, Bogdan

Journal:

Nature Communications

Year:

2018

Language:

english

File:

PDF, 915 KB

english, 2018

11

IBD Genetics: Focus on (Dys) Regulation in Immune Cells and the Epithelium

Kaser, Arthur, Pasaniuc, Bogdan

Journal:

Gastroenterology

Year:

2014

Language:

english

File:

PDF, 485 KB

english, 2014

12

Optimal Testing of Digital Microfluidic Biochips

Paşaniuc, Bogdan, Garfinkel, Robert, Măndoiu, Ion, Zelikovsky, Alex

Journal:

INFORMS Journal on Computing

Year:

2011

Language:

english

File:

PDF, 570 KB

english, 2011

13

Leveraging local ancestry to detect gene-gene interactions in genome-wide data

Aschard, Hugues, Gusev, Alexander, Brown, Robert, Pasaniuc, Bogdan

Journal:

Year:

2015

Language:

english

File:

PDF, 1.25 MB

english, 2015

14

Transcriptome-wide association studies accounting for colocalization using Egger regression

Barfield, Richard, Feng, Helian, Gusev, Alexander, Wu, Lang, Zheng, Wei, Pasaniuc, Bogdan, Kraft, Peter

Journal:

Genetic Epidemiology

Year:

2018

Language:

english

File:

PDF, 1.12 MB

english, 2018

15

New approaches to disease mapping in admixed populations

Seldin, Michael F., Pasaniuc, Bogdan, Price, Alkes L.

Journal:

Nature Reviews Genetics

Year:

2011

Language:

english

File:

PDF, 428 KB

english, 2011

16

Leveraging Functional-Annotation Data in Trans-ethnic Fine-Mapping Studies

Kichaev, Gleb, Pasaniuc, Bogdan

Journal:

The American Journal of Human Genetics

Year:

2015

Language:

english

File:

PDF, 731 KB

english, 2015

17

Improved methods for multi-trait fine mapping of pleiotropic risk loci

Kichaev, Gleb, Roytman, Megan, Johnson, Ruth, Eskin, Eleazar, Lindström, Sara, Kraft, Peter, Pasaniuc, Bogdan

Journal:

Year:

2016

Language:

english

File:

PDF, 465 KB

english, 2016

18

Leveraging ancestry to improve causal variant identification in exome sequencing for monogenic disorders

Brown, Robert, Lee, Hane, Eskin, Ascia, Kichaev, Gleb, Lohmueller, Kirk E, Reversade, Bruno, Nelson, Stanley F, Pasaniuc, Bogdan

Journal:

European Journal of Human Genetics

Year:

2015

Language:

english

File:

PDF, 613 KB

english, 2015

19

Enhanced Methods for Local Ancestry Assignment in Sequenced Admixed Individuals

Brown, Robert, Pasaniuc, Bogdan, Keinan, Alon

Journal:

PLoS Computational Biology

Year:

2014

Language:

english

File:

PDF, 718 KB

english, 2014

20

Combining effects from rare and common genetic variants in an exome-wide association study of sequence data

Hugues Aschard, Weiliang Qiu, Bogdan Pasaniuc, Noah Zaitlen, Michael H Cho, Vincent Carey

Journal:

BMC Proceedings

Year:

2011

Language:

english

File:

PDF, 207 KB

english, 2011

21

Extremely low-coverage sequencing and imputation increases power for genome-wide association studies

Pasaniuc, Bogdan, Rohland, Nadin, McLaren, Paul J, Garimella, Kiran, Zaitlen, Noah, Li, Heng, Gupta, Namrata, Neale, Benjamin M, Daly, Mark J, Sklar, Pamela, Sullivan, Patrick F, Bergen, Sarah, Moran,

Journal:

Nature Genetics

Year:

2012

Language:

english

File:

PDF, 1.46 MB

english, 2012

22

Genotype Error Detection Using Hidden Markov Models of Haplotype Diversity

Kennedy, Justin, Măndoiu, Ion, Paşaniuc, Bogdan

Journal:

Journal of Computational Biology

Year:

2008

Language:

english

File:

PDF, 660 KB

english, 2008

23

RAISS: Robust and Accurate imputation from Summary Statistics

Julienne, Hanna, Shi, Huwenbo, Pasaniuc, Bogdan, Aschard, Hugues, Schwartz, Russell

Journal:

Year:

2019

File:

PDF, 278 KB

2019

24

A generic coalescent-based framework for the selection of a reference panel for imputation

Bogdan Paşaniuc, Ram Avinery, Tom Gur, Christine F. Skibola, Paige M. Bracci, Eran Halperin

Journal:

Genetic Epidemiology

Year:

2010

Language:

english

File:

PDF, 641 KB

english, 2010

25

Inhibition of activated pericentromeric SINE/Alu repeat transcription in senescent human adult stem cells reinstates self-renewal

Wang, Jianrong, Geesman, Glenn J., Hostikka, Sirkka Liisa, Atallah, Michelle, Blackwell, Benjamin, Lee, Elbert, Cook, Peter J., Pasaniuc, Bogdan, Shariat, Goli, Halperin, Eran

Journal:

Year:

2011

Language:

english

File:

PDF, 6.56 MB

english, 2011

26

A Bayesian Framework for Multiple Trait Colocalization from Summary Association Statistics

Giambartolomei, Claudia, Zhenli Liu, Jimmy, Zhang, Wen, Hauberg, Mads, Shi, Huwenbo, Boocock, James, Pickrell, Joe, Jaffe, Andrew E, Pasaniuc, Bogdan, Roussos, Panos, Berger, Bonnie

Journal:

Year:

2018

Language:

english

File:

PDF, 1.20 MB

english, 2018

27

GAGA: A New Algorithm for Genomic Inference of Geographic Ancestry Reveals Fine Level Population Substructure in Europeans

Lao, Oscar, Liu, Fan, Wollstein, Andreas, Kayser, Manfred, Pasaniuc, Bogdan

Journal:

PLoS Computational Biology

Year:

2014

Language:

english

File:

PDF, 1.05 MB

english, 2014

28

[ACM Press the 5th ACM Conference - Newport Beach, California (2014.09.20-2014.09.23)] Proceedings of the 5th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics - BCB '14 - Identifying causal variants at loci with multiple signals of association

Hormozdiari, Farhad, Kostem, Emrah, kang, Eun Yong, Pasaniuc, Bogdan, Eskin, Eleazar

Year:

2014

Language:

english

File:

PDF, 249 KB

english, 2014

29

[IEEE Conference Proceedings. Annual International Conference of the IEEE Engineering in Medicine and Biology Society - New York, NY (2006.08.30-2006.09.3)] 2006 International Conference of the IEEE Engineering in Medicine and Biology Society - Highly Scalable Genotype Phasing by Entropy Minimization

Pasaniuc, Bogdan, Mandoiu, Ion

Year:

2006

Language:

english

File:

PDF, 232 KB

english, 2006

30

Integrative analysis of Dupuytren's disease identifies novel risk locus and reveals a shared genetic etiology with BMI

Major, Megan, Freund, Malika K., Burch, Kathryn S., Mancuso, Nicholas, Ng, Michael, Furniss, Dominic, Pasaniuc, Bogdan, Ophoff, Roel A.

Journal:

Genetic Epidemiology

Year:

2019

File:

PDF, 1.24 MB

2019

31

A Spatial Haplotype Copying Model with Applications to Genotype Imputation

Yang, Wen-Yun, Hormozdiari, Farhad, Eskin, Eleazar, Pasaniuc, Bogdan

Journal:

Journal of Computational Biology

Year:

2015

Language:

english

File:

PDF, 523 KB

english, 2015

32

Amerindian-specific regions under positive selection harbour new lipid variants in Latinos

Ko, Arthur, Cantor, Rita M., Weissglas-Volkov, Daphna, Nikkola, Elina, Reddy, Prasad M. V. Linga, Sinsheimer, Janet S., Pasaniuc, Bogdan, Brown, Robert, Alvarez, Marcus, Rodriguez, Alejandra, Rodrigue

Journal:

Nature Communications

Year:

2014

Language:

english

File:

PDF, 821 KB

english, 2014

33

Probabilistic fine-mapping of transcriptome-wide association studies

Mancuso, Nicholas, Freund, Malika K., Johnson, Ruth, Shi, Huwenbo, Kichaev, Gleb, Gusev, Alexander, Pasaniuc, Bogdan

Journal:

Nature Genetics

Year:

2019

Language:

english

File:

PDF, 3.79 MB

english, 2019

34

Accurate estimation of SNP-heritability from biobank-scale data irrespective of genetic architecture

Hou, Kangcheng, Burch, Kathryn S., Majumdar, Arunabha, Shi, Huwenbo, Mancuso, Nicholas, Wu, Yue, Sankararaman, Sriram, Pasaniuc, Bogdan

Journal:

Nature Genetics

Year:

2019

Language:

english

File:

PDF, 7.20 MB

english, 2019

35

Local Genetic Correlation Gives Insights into the Shared Genetic Architecture of Complex Traits

Shi, Huwenbo, Mancuso, Nicholas, Spendlove, Sarah, Pasaniuc, Bogdan

Journal:

The American Journal of Human Genetics

Year:

2017

Language:

english

File:

PDF, 1.41 MB

english, 2017

36

Using population admixture to help complete maps of the human genome

Genovese, Giulio, Handsaker, Robert E, Li, Heng, Altemose, Nicolas, Lindgren, Amelia M, Chambert, Kimberly, Pasaniuc, Bogdan, Price, Alkes L, Reich, David, Morton, Cynthia C, Pollak, Martin R, Wilson,

Journal:

Nature Genetics

Year:

2013

Language:

english

File:

PDF, 1.21 MB

english, 2013

37

A multivariate Bernoulli model to predict DNaseI hypersensitivity status from haplotype data

Shi, Huwenbo, Pasaniuc, Bogdan, Lange, Kenneth L.

Journal:

Year:

2015

Language:

english

File:

PDF, 749 KB

english, 2015

38

Integrative analysis of Dupuytren's disease identifies novel risk locus and reveals a shared genetic etiology with BMI

Major, Megan, Freund, Malika K., Burch, Kathryn S., Mancuso, Nicholas, Ng, Michael, Furniss, Dominic, Pasaniuc, Bogdan, Ophoff, Roel A.

Journal:

Genetic Epidemiology

Year:

2019

Language:

english

File:

PDF, 1.24 MB

english, 2019

39

Integrating Gene Expression with Summary Association Statistics to Identify Genes Associated with 30 Complex Traits

Mancuso, Nicholas, Shi, Huwenbo, Goddard, Pagé, Kichaev, Gleb, Gusev, Alexander, Pasaniuc, Bogdan

Journal:

The American Journal of Human Genetics

Year:

2017

Language:

english

File:

PDF, 1.52 MB

english, 2017

40

Nausea and Vomiting of Pregnancy and HG Risk Genes Associated With Blood Levels, Sleep, Stomach Pain, and Other Traits [23N]

Fejzo, Marlena S., Burch, Kathryn, Mullin, Patrick, MacGibbon, Kimber W., Pasaniuc, Bogdan

Journal:

Obstetrics & Gynecology

Year:

2020

File:

PDF, 155 KB

2020

41

Optimized design of single-cell RNA sequencing experiments for cell-type-specific eQTL analysis

Mandric, Igor, Schwarz, Tommer, Majumdar, Arunabha, Hou, Kangcheng, Briscoe, Leah, Perez, Richard, Subramaniam, Meena, Hafemeister, Christoph, Satija, Rahul, Ye, Chun Jimmie, Pasaniuc, Bogdan, Halperi

Journal:

Nature Communications

Year:

2020

File:

PDF, 2.41 MB

2020

42

Genotyping common and rare variation using overlapping pool sequencing

Dan He, Noah Zaitlen, Bogdan Pasaniuc, Eleazar Eskin, Eran Halperin

Journal:

BMC Bioinformatics

Year:

2011

Language:

english

File:

PDF, 272 KB

english, 2011

43

Identification of causal genes for complex traits

Hormozdiari, Farhad, Kichaev, Gleb, Yang, Wen-Yun, Pasaniuc, Bogdan, Eskin, Eleazar

Journal:

Year:

2015

Language:

english

File:

PDF, 350 KB

english, 2015

44

Leveraging Polygenic Functional Enrichment to Improve GWAS Power

Kichaev, Gleb, Bhatia, Gaurav, Loh, Po-Ru, Gazal, Steven, Burch, Kathryn, Freund, Malika K., Schoech, Armin, Pasaniuc, Bogdan, Price, Alkes L.

Journal:

The American Journal of Human Genetics

Year:

2018

Language:

english

File:

PDF, 609 KB

english, 2018

45

Accurate Estimation of Expression Levels of Homologous Genes in RNA-seq Experiments

Paşaniuc, Bogdan, Zaitlen, Noah, Halperin, Eran

Journal:

Journal of Computational Biology

Year:

2011

Language:

english

File:

PDF, 923 KB

english, 2011

46

Enhanced Statistical Tests for GWAS in Admixed Populations: Assessment using African Americans from CARe and a Breast Cancer Consortium

Pasaniuc, Bogdan, Zaitlen, Noah, Lettre, Guillaume, Chen, Gary K., Tandon, Arti, Kao, W. H. Linda, Ruczinski, Ingo, Fornage, Myriam, Siscovick, David S., Zhu, Xiaofeng, Larkin, Emma, Lange, Leslie A.,

Journal:

Year:

2011

Language:

english

File:

PDF, 652 KB

english, 2011

47

A Genetic Population Isolate in The Netherlands Showing Extensive Haplotype Sharing and Long Regions of Homozygosity

Somers, Metten, Olde Loohuis, Loes, Aukes, Maartje, Pasaniuc, Bogdan, de Visser, Kees, Kahn, René, Sommer, Iris, Ophoff, Roel

Journal:

Year:

2017

Language:

english

File:

PDF, 1.35 MB

english, 2017

48

Contrasting the Genetic Architecture of 30 Complex Traits from Summary Association Data

Shi, Huwenbo, Kichaev, Gleb, Pasaniuc, Bogdan

Journal:

The American Journal of Human Genetics

Year:

2016

Language:

english

File:

PDF, 612 KB

english, 2016

49

Leveraging Genetic Variability across Populations for the Identification of Causal Variants

Noah Zaitlen, Bogdan Paşaniuc, Tom Gur, Elad Ziv, Eran Halperin

Journal:

The American Journal of Human Genetics

Year:

2010

Language:

english

File:

PDF, 904 KB

english, 2010

50

Transcriptomic insight into the polygenic mechanisms underlying psychiatric disorders

Hernandez, Leanna M., Kim, Minsoo, Hoftman, Gil D., Haney, Jillian R., Ubieta, Luis de la Torre, Pasaniuc, Bogdan, Gandal, Michael J.

Journal:

Biological Psychiatry

Year:

2020

File:

PDF, 3.41 MB

2020

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